HL_9E0P_048
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 9E0P|1|A|G|2178, 9E0P|1|A|U|2179
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E0P_048 not in the Motif Atlas
- Geometric match to HL_4WF9_046
- Geometric discrepancy: 0.2102
- The information below is about HL_4WF9_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20167.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9E0P|1|A|G|2173
9E0P|1|A|G|2174
9E0P|1|A|U|2175
9E0P|1|A|A|2176
9E0P|1|A|A|2177
9E0P|1|A|G|2178
9E0P|1|A|U|2179
9E0P|1|A|U|2180
9E0P|1|A|C|2181
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain L
- Large ribosomal subunit protein uL14
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: