HL_9E16_008
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGAAUAUAUAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E16_008 not in the Motif Atlas
- Homologous match to HL_8B0X_037
- Geometric discrepancy: 0.2614
- The information below is about HL_8B0X_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50765.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9E16|1|I|U|160
9E16|1|I|G|161
9E16|1|I|A|162
9E16|1|I|A|163
9E16|1|I|U|164
9E16|1|I|A|165
9E16|1|I|U|166
9E16|1|I|A|167
9E16|1|I|U|168
9E16|1|I|A|169
9E16|1|I|G|170
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain y
- 50S ribosomal protein L28 C-
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