HL_9E1S_017
3D structure
- PDB id
- 9E1S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- GCCCGUGGAAU
- Length
- 11 nucleotides
- Bulged bases
- 9E1S|1|I|G|475, 9E1S|1|I|G|478
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E1S_017 not in the Motif Atlas
- Homologous match to HL_8B0X_044
- Geometric discrepancy: 0.2485
- The information below is about HL_8B0X_044
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.8
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9E1S|1|I|G|471
9E1S|1|I|C|472
9E1S|1|I|C|473
9E1S|1|I|C|474
9E1S|1|I|G|475
9E1S|1|I|U|476
9E1S|1|I|G|477
9E1S|1|I|G|478
9E1S|1|I|A|479
9E1S|1|I|A|480
9E1S|1|I|U|481
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain L
- 50S ribosomal protein L15
- Chain y
- 50S ribosomal protein bL28-c minus
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