HL_9ED0_005

3D structure

PDB id

9ED0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human LARP1 bound to the 40S small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

9ED0|1|2|G|385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ED0|1|2|G|377
9ED0|1|2|U|378
9ED0|1|2|C|379
9ED0|1|2|G|380
9ED0|1|2|C|381
9ED0|1|2|C|382
9ED0|1|2|G|383
9ED0|1|2|U|384
9ED0|1|2|G|385
9ED0|1|2|C|386
9ED0|1|2|C|387

Current chains

Chain 2

rRNA

Nearby chains

Chain I

Small ribosomal subunit protein eS8

Chain L

Small ribosomal subunit protein uS17