HL_9EHO_076
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9EHO|1|AA|U|1679
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|AA|G|1672
9EHO|1|AA|A|1673
9EHO|1|AA|U|1674
9EHO|1|AA|C|1675
9EHO|1|AA|A|1676
9EHO|1|AA|G|1677
9EHO|1|AA|A|1678
9EHO|1|AA|U|1679
9EHO|1|AA|A|1680
9EHO|1|AA|C|1681
9EHO|1|AA|C|1682
Current chains
- Chain AA
- 18S rRNA
Nearby chains
- Chain 1
- RNA (5'-R(P*AP*CP*CP*AP*AP*AP*AP*AP*CP*C)-3')
- Chain 3
- Transfer RNA; tRNA
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain PP
- 40S ribosomal protein S14a
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