HL_9F1B_015
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- UG(PSU)UCAAAG
- Length
- 9 nucleotides
- Bulged bases
- 9F1B|1|A2|G|822
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F1B_015 not in the Motif Atlas
- Homologous match to HL_8C3A_208
- Geometric discrepancy: 0.1109
- The information below is about HL_8C3A_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_85367.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9F1B|1|A2|U|821
9F1B|1|A2|G|822
9F1B|1|A2|PSU|823
9F1B|1|A2|U|824
9F1B|1|A2|C|825
9F1B|1|A2|A|826
9F1B|1|A2|A|827
9F1B|1|A2|A|828
9F1B|1|A2|G|829
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain Ad
- 40S ribosomal protein S4
- Chain Ai
- 40S ribosomal protein S9
- Chain Ax
- 40S ribosomal protein S24
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