HL_9F1B_064

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

UGUAACAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9F1B_064 not in the Motif Atlas

Homologous match to HL_8C3A_028

Geometric discrepancy: 0.1846

The information below is about HL_8C3A_028

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_27115.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

22

Unit IDs

9F1B|1|B5|U|1945
9F1B|1|B5|G|1946
9F1B|1|B5|U|1947
9F1B|1|B5|A|1948
9F1B|1|B5|A|1949
9F1B|1|B5|C|1950
9F1B|1|B5|A|1951
9F1B|1|B5|A|1952

Current chains

Chain B5

28S rRNA

Nearby chains

Chain Bs

Large ribosomal subunit protein uL10

Chain Bt

60S ribosomal protein L12