HL_9F58_006
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAACCG
- Length
- 6 nucleotides
- Bulged bases
- 9F58|1|a|C|73
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F58_006 not in the Motif Atlas
- Homologous match to HL_8P9A_114
- Geometric discrepancy: 0.1054
- The information below is about HL_8P9A_114
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_51020.2
- Basepair signature
- cWW-cSW-F
- Number of instances in this motif group
- 14
Unit IDs
9F58|1|a|C|69
9F58|1|a|A|70
9F58|1|a|A|71
9F58|1|a|C|72
9F58|1|a|C|73
9F58|1|a|G|74
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain L
- 60S ribosomal protein L28
- Chain U
- 60S ribosomal protein L36-A
- Chain m
- 60S ribosomal protein L13-A
- Chain o
- 60S ribosomal protein L15-A
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