HL_9F58_032
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUGAUAUGAUG
- Length
- 11 nucleotides
- Bulged bases
- 9F58|1|a|U|1351, 9F58|1|a|G|1354, 9F58|1|a|U|1356
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F58_032 not in the Motif Atlas
- Homologous match to HL_8P9A_141
- Geometric discrepancy: 0.3021
- The information below is about HL_8P9A_141
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_29762.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
9F58|1|a|U|1347
9F58|1|a|U|1348
9F58|1|a|G|1349
9F58|1|a|A|1350
9F58|1|a|U|1351
9F58|1|a|A|1352
9F58|1|a|U|1353
9F58|1|a|G|1354
9F58|1|a|A|1355
9F58|1|a|U|1356
9F58|1|a|G|1357
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain 3
- 60S ribosomal protein L4-A
- Chain Q
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L6-A
- Chain r
- 60S ribosomal protein L18-A
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