HL_9F58_037
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUAAGAUUC
- Length
- 10 nucleotides
- Bulged bases
- 9F58|1|a|U|1606, 9F58|1|a|U|1607
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F58_037 not in the Motif Atlas
- Homologous match to HL_8P9A_146
- Geometric discrepancy: 0.098
- The information below is about HL_8P9A_146
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77449.1
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
9F58|1|a|G|1599
9F58|1|a|U|1600
9F58|1|a|U|1601
9F58|1|a|A|1602
9F58|1|a|A|1603
9F58|1|a|G|1604
9F58|1|a|A|1605
9F58|1|a|U|1606
9F58|1|a|U|1607
9F58|1|a|C|1608
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain S
- 60S ribosomal protein L34-A
- Chain s
- 60S ribosomal protein L19-A
- Chain z
- 60S ribosomal protein L25
Coloring options: