HL_9F58_047
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 9F58|1|a|A|2138, 9F58|1|a|A|2139, 9F58|1|a|U|2140, 9F58|1|a|A|2144
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F58_047 not in the Motif Atlas
- Homologous match to HL_8P9A_157
- Geometric discrepancy: 0.0655
- The information below is about HL_8P9A_157
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9F58|1|a|U|2135
9F58|1|a|C|2136
9F58|1|a|U|2137
9F58|1|a|A|2138
9F58|1|a|A|2139
9F58|1|a|U|2140
9F58|1|a|U|2141
9F58|1|a|A|2142
9F58|1|a|A|2143
9F58|1|a|A|2144
9F58|1|a|A|2145
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain V
- 60S ribosomal protein L37-A
- Chain c
- 60S ribosomal protein L2-A
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