HL_9F58_056
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUAAACGAUAACG
- Length
- 13 nucleotides
- Bulged bases
- 9F58|1|a|A|2637, 9F58|1|a|C|2644
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F58_056 not in the Motif Atlas
- Homologous match to HL_8P9A_166
- Geometric discrepancy: 0.077
- The information below is about HL_8P9A_166
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.1
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9F58|1|a|U|2633
9F58|1|a|U|2634
9F58|1|a|A|2635
9F58|1|a|A|2636
9F58|1|a|A|2637
9F58|1|a|C|2638
9F58|1|a|G|2639
9F58|1|a|A|2640
9F58|1|a|U|2641
9F58|1|a|A|2642
9F58|1|a|A|2643
9F58|1|a|C|2644
9F58|1|a|G|2645
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain M
- 60S ribosomal protein L29
- Chain j
- 60S ribosomal protein L10
- Chain u
- 60S ribosomal protein L21-A
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