HL_9F58_062
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUUCAUAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F58_062 not in the Motif Atlas
- Homologous match to HL_8P9A_172
- Geometric discrepancy: 0.1286
- The information below is about HL_8P9A_172
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9F58|1|a|C|2840
9F58|1|a|G|2841
9F58|1|a|U|2842
9F58|1|a|U|2843
9F58|1|a|C|2844
9F58|1|a|A|2845
9F58|1|a|U|2846
9F58|1|a|A|2847
9F58|1|a|G|2848
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain Y
- Ubiquitin-60S ribosomal protein L40
- Chain j
- 60S ribosomal protein L10
Coloring options: