HL_9G06_030
3D structure
- PDB id
- 9G06 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 30S-IF1-IF3-mRNA-fMet-tRNA-GE81112A complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G06_030 not in the Motif Atlas
- Homologous match to HL_6CFJ_107
- Geometric discrepancy: 0.1333
- The information below is about HL_6CFJ_107
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 42
Unit IDs
9G06|1|a|G|31
9G06|1|a|C|32
9G06|1|a|U|33
9G06|1|a|C|34
9G06|1|a|A|35
9G06|1|a|U|36
9G06|1|a|A|37
9G06|1|a|A|38
9G06|1|a|C|39
Current chains
- Chain a
- fMet-tRNA
Nearby chains
- Chain B
- Small subunit ribosomal RNA; SSU rRNA
- Chain J
- Translation initiation factor IF-3
- Chain Y
- mRNA
- Chain b
- Small ribosomal subunit protein uS9
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