HL_9G33_002

3D structure

PDB id

9G33 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stalled 90S - Utp23-Krr1-deltaC3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CGUCAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9G33_002 not in the Motif Atlas

Geometric match to HL_8CRE_018

Geometric discrepancy: 0.2061

The information below is about HL_8CRE_018

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

9G33|1|D2|C|120
9G33|1|D2|G|121
9G33|1|D2|U|122
9G33|1|D2|C|123
9G33|1|D2|A|124
9G33|1|D2|G|125

Current chains

Chain D2

5' ETS

Nearby chains

Chain US

Nucleolar complex protein 4