HL_9G6J_031
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- GAUUUUUC
- Length
- 8 nucleotides
- Bulged bases
- 9G6J|1|1|U|1566
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G6J_031 not in the Motif Atlas
- Homologous match to HL_8CRE_033
- Geometric discrepancy: 0.4392
- The information below is about HL_8CRE_033
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_28075.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9G6J|1|1|G|1562
9G6J|1|1|A|1563
9G6J|1|1|U|1564
9G6J|1|1|U|1565
9G6J|1|1|U|1566
9G6J|1|1|U|1567
9G6J|1|1|U|1568
9G6J|1|1|C|1569
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain 8
- Ribosomal 60S subunit protein L25
Coloring options: