HL_9G6J_051
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- UUAAACGAUAACG
- Length
- 13 nucleotides
- Bulged bases
- 9G6J|1|1|A|2609, 9G6J|1|1|C|2616
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G6J_051 not in the Motif Atlas
- Homologous match to HL_8P9A_166
- Geometric discrepancy: 0.0642
- The information below is about HL_8P9A_166
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91939.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
9G6J|1|1|U|2605
9G6J|1|1|U|2606
9G6J|1|1|A|2607
9G6J|1|1|A|2608
9G6J|1|1|A|2609
9G6J|1|1|C|2610
9G6J|1|1|G|2611
9G6J|1|1|A|2612
9G6J|1|1|U|2613
9G6J|1|1|A|2614
9G6J|1|1|A|2615
9G6J|1|1|C|2616
9G6J|1|1|G|2617
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 2
- Ribosomal 60S subunit protein L21A
- Chain AC
- 60S ribosomal protein L29
- Chain r
- Ribosomal 60S subunit protein L10
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