HL_9G6J_077

3D structure

PDB id

9G6J (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.15 Å

Loop

Sequence

GUAAUUC

Length

7 nucleotides

Bulged bases

9G6J|1|A|U|156, 9G6J|1|A|U|157

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9G6J_077 not in the Motif Atlas

Homologous match to HL_8CRE_193

Geometric discrepancy: 0.1256

The information below is about HL_8CRE_193

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

9G6J|1|A|G|152
9G6J|1|A|U|153
9G6J|1|A|A|154
9G6J|1|A|A|155
9G6J|1|A|U|156
9G6J|1|A|U|157
9G6J|1|A|C|158

Current chains

Chain A

18S rRNA

Nearby chains

Chain H

40S ribosomal protein S6

Chain Z

40S ribosomal protein S24