HL_9G6J_081
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- GAUAGUGGC
- Length
- 9 nucleotides
- Bulged bases
- 9G6J|1|A|G|335
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G6J_081 not in the Motif Atlas
- Homologous match to HL_8CRE_198
- Geometric discrepancy: 0.0552
- The information below is about HL_8CRE_198
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87268.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9G6J|1|A|G|328
9G6J|1|A|A|329
9G6J|1|A|U|330
9G6J|1|A|A|331
9G6J|1|A|G|332
9G6J|1|A|U|333
9G6J|1|A|G|334
9G6J|1|A|G|335
9G6J|1|A|C|336
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain J
- 40S ribosomal protein S8
- Chain M
- Ribosomal 40S subunit protein S11A
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