HL_9G6J_094
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- UCUUUUAUUG
- Length
- 10 nucleotides
- Bulged bases
- 9G6J|1|A|U|1047
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G6J_094 not in the Motif Atlas
- Homologous match to HL_8CRE_213
- Geometric discrepancy: 0.3374
- The information below is about HL_8CRE_213
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69139.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9G6J|1|A|U|1040
9G6J|1|A|C|1041
9G6J|1|A|U|1042
9G6J|1|A|U|1043
9G6J|1|A|U|1044
9G6J|1|A|U|1045
9G6J|1|A|A|1046
9G6J|1|A|U|1047
9G6J|1|A|U|1048
9G6J|1|A|G|1049
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain C
- 40S ribosomal protein S1
- Chain c
- 40S ribosomal protein S27
Coloring options: