HL_9G6J_097
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- GACUCAACAC
- Length
- 10 nucleotides
- Bulged bases
- 9G6J|1|A|A|1181
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G6J_097 not in the Motif Atlas
- Homologous match to HL_8P9A_215
- Geometric discrepancy: 0.1017
- The information below is about HL_8P9A_215
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9G6J|1|A|G|1173
9G6J|1|A|A|1174
9G6J|1|A|C|1175
9G6J|1|A|U|1176
9G6J|1|A|C|1177
9G6J|1|A|A|1178
9G6J|1|A|A|1179
9G6J|1|A|C|1180
9G6J|1|A|A|1181
9G6J|1|A|C|1182
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain AT
- Transfer RNA; tRNA
- Chain PT
- Transfer RNA; tRNA
- Chain R
- Ribosomal 40S subunit protein S16A
- Chain V
- Ribosomal 40S subunit protein S20
- Chain e
- Ribosomal 40S subunit protein S29A
- Chain g
- Ubiquitin-ribosomal 40S subunit protein S31 fusion protein
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