HL_9GFT_024
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUGAA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GFT_024 not in the Motif Atlas
- Homologous match to HL_5J7L_023
- Geometric discrepancy: 0.1595
- The information below is about HL_5J7L_023
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
9GFT|1|0|U|1076
9GFT|1|0|G|1077
9GFT|1|0|U|1078
9GFT|1|0|G|1079
9GFT|1|0|A|1080
9GFT|1|0|A|1081
Current chains
- Chain 0
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Small ribosomal subunit protein uS2
- Chain 4
- Small ribosomal subunit protein uS5
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