HL_9GFT_100
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- 9GFT|1|AV|U|1094
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GFT_100 not in the Motif Atlas
- Homologous match to HL_6PRV_002
- Geometric discrepancy: 0.5541
- The information below is about HL_6PRV_002
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9GFT|1|AV|C|1092
9GFT|1|AV|G|1093
9GFT|1|AV|U|1094
9GFT|1|AV|A|1095
9GFT|1|AV|A|1096
9GFT|1|AV|U|1097
9GFT|1|AV|A|1098
9GFT|1|AV|G|1099
Current chains
- Chain AV
- 23S RNA
Nearby chains
- Chain Ab
- Large ribosomal subunit protein uL6
- Chain Ad
- 50S ribosomal protein L11
- Chain Az
- Large ribosomal subunit protein bL36A
Coloring options: