HL_9GFT_141
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAUGCCG
- Length
- 7 nucleotides
- Bulged bases
- 9GFT|1|AW|G|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GFT_141 not in the Motif Atlas
- Homologous match to HL_8C3A_073
- Geometric discrepancy: 0.2274
- The information below is about HL_8C3A_073
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47787.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9GFT|1|AW|C|38
9GFT|1|AW|A|39
9GFT|1|AW|U|40
9GFT|1|AW|G|41
9GFT|1|AW|C|42
9GFT|1|AW|C|43
9GFT|1|AW|G|44
Current chains
- Chain AW
- 5S ribosomal RNA
Nearby chains
- Chain AT
- Large ribosomal subunit protein bL31A
- Chain AV
- Large subunit ribosomal RNA; LSU rRNA
- Chain Aa
- Large ribosomal subunit protein uL5
- Chain Aj
- Large ribosomal subunit protein uL18
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