HL_9GHG_095
3D structure
- PDB id
- 9GHG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9GHG|1|a|U|801
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHG_095 not in the Motif Atlas
- Homologous match to HL_4LFB_017
- Geometric discrepancy: 0.0675
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
9GHG|1|a|G|794
9GHG|1|a|A|795
9GHG|1|a|U|796
9GHG|1|a|U|797
9GHG|1|a|A|798
9GHG|1|a|G|799
9GHG|1|a|A|800
9GHG|1|a|U|801
9GHG|1|a|A|802
9GHG|1|a|C|803
9GHG|1|a|C|804
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- Transfer RNA; tRNA
- Chain F
- Transfer RNA; tRNA
- Chain b
- mRNA
- Chain l
- 30S ribosomal protein S11
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