HL_9GHG_106
3D structure
- PDB id
- 9GHG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- GAUCAGCAUGC
- Length
- 11 nucleotides
- Bulged bases
- 9GHG|1|a|U|1374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHG_106 not in the Motif Atlas
- Homologous match to HL_5J7L_029
- Geometric discrepancy: 0.1105
- The information below is about HL_5J7L_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9GHG|1|a|G|1366
9GHG|1|a|A|1367
9GHG|1|a|U|1368
9GHG|1|a|C|1369
9GHG|1|a|A|1370
9GHG|1|a|G|1371
9GHG|1|a|C|1372
9GHG|1|a|A|1373
9GHG|1|a|U|1374
9GHG|1|a|G|1375
9GHG|1|a|C|1376
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain j
- 30S ribosomal protein S9
- Chain k
- Small ribosomal subunit protein uS10
- Chain o
- 30S ribosomal protein S14 type Z
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