HL_9GHH_006
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAAACAUC
- Length
- 8 nucleotides
- Bulged bases
- 9GHH|1|A|A|199, 9GHH|1|A|A|202
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHH_006 not in the Motif Atlas
- Homologous match to HL_9DFE_005
- Geometric discrepancy: 0.0687
- The information below is about HL_9DFE_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_30068.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
9GHH|1|A|G|197
9GHH|1|A|A|198
9GHH|1|A|A|199
9GHH|1|A|A|200
9GHH|1|A|C|201
9GHH|1|A|A|202
9GHH|1|A|U|203
9GHH|1|A|C|204
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L28
- Chain D
- Transfer RNA; tRNA
- Chain O
- 50S ribosomal protein L15
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