HL_9GHH_012
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUAAUAAUC
- Length
- 9 nucleotides
- Bulged bases
- 9GHH|1|A|A|372, 9GHH|1|A|A|373, 9GHH|1|A|U|374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHH_012 not in the Motif Atlas
- Homologous match to HL_5J7L_144
- Geometric discrepancy: 0.0948
- The information below is about HL_5J7L_144
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.2
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 13
Unit IDs
9GHH|1|A|G|370
9GHH|1|A|U|371
9GHH|1|A|A|372
9GHH|1|A|A|373
9GHH|1|A|U|374
9GHH|1|A|A|375
9GHH|1|A|A|376
9GHH|1|A|U|377
9GHH|1|A|C|378
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain I
- 50S ribosomal protein L4
- Chain X
- 50S ribosomal protein L24
Coloring options: