HL_9GHH_045
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUUAUCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 9GHH|1|A|A|1807, 9GHH|1|A|U|1808, 9GHH|1|A|C|1809, 9GHH|1|A|A|1813
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHH_045 not in the Motif Atlas
- Homologous match to HL_5J7L_178
- Geometric discrepancy: 0.0749
- The information below is about HL_5J7L_178
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01962.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
9GHH|1|A|U|1804
9GHH|1|A|U|1805
9GHH|1|A|U|1806
9GHH|1|A|A|1807
9GHH|1|A|U|1808
9GHH|1|A|C|1809
9GHH|1|A|A|1810
9GHH|1|A|A|1811
9GHH|1|A|A|1812
9GHH|1|A|A|1813
9GHH|1|A|A|1814
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 7
- 50S ribosomal protein L34
- Chain G
- 50S ribosomal protein L2
Coloring options: