HL_9GHH_073
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHH_073 not in the Motif Atlas
- Homologous match to HL_5UD5_002
- Geometric discrepancy: 0.1878
- The information below is about HL_5UD5_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_77082.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
9GHH|1|D|G|31
9GHH|1|D|C|32
9GHH|1|D|U|33
9GHH|1|D|C|34
9GHH|1|D|A|35
9GHH|1|D|U|36
9GHH|1|D|A|37
9GHH|1|D|A|38
9GHH|1|D|C|39
Current chains
- Chain D
- E-site tRNA
Nearby chains
- Chain F
- Transfer RNA; tRNA
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain b
- mRNA
- Chain h
- 30S ribosomal protein S7
- Chain l
- 30S ribosomal protein S11
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