HL_9GHH_083

3D structure

PDB id

9GHH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UCUUG

Length

5 nucleotides

Bulged bases

9GHH|1|a|C|219, 9GHH|1|a|U|221

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GHH_083 not in the Motif Atlas

Geometric match to HL_8VMA_002

Geometric discrepancy: 0.1767

The information below is about HL_8VMA_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

9GHH|1|a|U|218
9GHH|1|a|C|219
9GHH|1|a|U|220
9GHH|1|a|U|221
9GHH|1|a|G|222

Current chains

Chain a

16S rRNA

Nearby chains