HL_9GMO_020
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GCGAAAGAC
- Length
- 9 nucleotides
- Bulged bases
- 9GMO|1|A|A|1630, 9GMO|1|A|G|1633
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GMO_020 not in the Motif Atlas
- Homologous match to HL_8P9A_133
- Geometric discrepancy: 0.1566
- The information below is about HL_8P9A_133
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_92598.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9GMO|1|A|G|1627
9GMO|1|A|C|1628
9GMO|1|A|G|1629
9GMO|1|A|A|1630
9GMO|1|A|A|1631
9GMO|1|A|A|1632
9GMO|1|A|G|1633
9GMO|1|A|A|1634
9GMO|1|A|C|1635
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain 0
- Cytoplasmic 60S subunit biogenesis factor ZNF622
- Chain D
- 60S ribosomal protein L8
- Chain d
- 60S ribosomal protein L37
- Chain l
- 60S ribosomal protein L15
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