HL_9GMO_066
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- CACUUG
- Length
- 6 nucleotides
- Bulged bases
- 9GMO|1|C|U|111
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GMO_066 not in the Motif Atlas
- Homologous match to HL_8P9A_188
- Geometric discrepancy: 0.2357
- The information below is about HL_8P9A_188
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13184.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9GMO|1|C|C|107
9GMO|1|C|A|108
9GMO|1|C|C|109
9GMO|1|C|U|110
9GMO|1|C|U|111
9GMO|1|C|G|112
Current chains
- Chain C
- 5.8S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain R
- 60S ribosomal protein L23a
- Chain d
- 60S ribosomal protein L37
- Chain f
- 60S ribosomal protein L39
Coloring options: