HL_9GR1_047

3D structure

PDB id

9GR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-TEC complex in delivery state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

9GR1|1|a|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GR1_047 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.0486

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

9GR1|1|a|A|382
9GR1|1|a|C|383
9GR1|1|a|A|384
9GR1|1|a|C|385
9GR1|1|a|G|386
9GR1|1|a|U|387
9GR1|1|a|G|388
9GR1|1|a|G|389
9GR1|1|a|U|390
9GR1|1|a|A|391
9GR1|1|a|U|392

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain w

50S ribosomal protein L28