HL_9GUL_049

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GUAAC(B8H)A(PSU)GAC

Length

11 nucleotides

Bulged bases

9GUL|1|L5|A|3760

QA status

Modified nucleotides: B8H, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GUL_049 not in the Motif Atlas

Homologous match to HL_9PN5_047

Geometric discrepancy: 0.3613

The information below is about HL_9PN5_047

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82185.4

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

7

Unit IDs

9GUL|1|L5|G|3757
9GUL|1|L5|U|3758
9GUL|1|L5|A|3759
9GUL|1|L5|A|3760
9GUL|1|L5|C|3761
9GUL|1|L5|B8H|3762
9GUL|1|L5|A|3763
9GUL|1|L5|PSU|3764
9GUL|1|L5|G|3765
9GUL|1|L5|A|3766
9GUL|1|L5|C|3767

Current chains

Chain L5

28S rRNA

Nearby chains