HL_9H3G_020

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

UCUUG(1MA)AAC(A2M)

Length

10 nucleotides

Bulged bases

9H3G|1|A|C|660

QA status

Modified nucleotides: 1MA, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3G|1|A|U|652
9H3G|1|A|C|653
9H3G|1|A|U|654
9H3G|1|A|U|655
9H3G|1|A|G|656
9H3G|1|A|1MA|657
9H3G|1|A|A|658
9H3G|1|A|A|659
9H3G|1|A|C|660
9H3G|1|A|A2M|661

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain AR

60S ribosomal protein L29

Chain AV

Large ribosomal subunit protein eL32z

Chain BS

Large ribosomal subunit protein uL3z

Chain Ha

Large ribosomal subunit protein uL15x