HL_9H3G_027

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

GCGAAAGAC

Length

9 nucleotides

Bulged bases

9H3G|1|A|A|922, 9H3G|1|A|G|925

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46211.1

Basepair signature

cWW-cWW-tSW-F

Number of instances in this motif group

10

Unit IDs

9H3G|1|A|G|919
9H3G|1|A|C|920
9H3G|1|A|G|921
9H3G|1|A|A|922
9H3G|1|A|A|923
9H3G|1|A|A|924
9H3G|1|A|G|925
9H3G|1|A|A|926
9H3G|1|A|C|927

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain AY

Large ribosomal subunit protein eL37z

Chain BQ

Large ribosomal subunit protein uL2z

Chain Ea

Large ribosomal subunit protein eL15z