HL_9H3O_007

3D structure

PDB id

9H3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-_GAC

Experimental method

ELECTRON MICROSCOPY

Resolution

4.54 Å

Loop

Sequence

CAACCG

Length

6 nucleotides

Bulged bases

9H3O|1|A|C|228

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3O_007 not in the Motif Atlas

Homologous match to HL_5J7L_140

Geometric discrepancy: 0.5477

The information below is about HL_5J7L_140

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_62934.1

Basepair signature

cWW-tSH-F

Number of instances in this motif group

2

Unit IDs

9H3O|1|A|C|225
9H3O|1|A|A|226
9H3O|1|A|A|227
9H3O|1|A|C|228
9H3O|1|A|C|229
9H3O|1|A|G|230

Current chains

Chain A

23S ribosomal RNA

Nearby chains