HL_9H3O_015

3D structure

PDB id

9H3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-_GAC

Experimental method

ELECTRON MICROSCOPY

Resolution

4.54 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

9H3O|1|A|C|490

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3O_015 not in the Motif Atlas

Homologous match to HL_5J7L_148

Geometric discrepancy: 0.2845

The information below is about HL_5J7L_148

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

9H3O|1|A|C|487
9H3O|1|A|G|488
9H3O|1|A|G|489
9H3O|1|A|C|490
9H3O|1|A|G|491
9H3O|1|A|A|492
9H3O|1|A|G|493

Current chains

Chain A

23S ribosomal RNA

Nearby chains