HL_9H3P_034

3D structure

PDB id

9H3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

7.06 Å

Loop

Sequence

GGCAAAUCC

Length

9 nucleotides

Bulged bases

9H3P|1|A|C|1493, 9H3P|1|A|U|1497

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3P_034 not in the Motif Atlas

Geometric match to HL_8C3A_054

Geometric discrepancy: 0.166

The information below is about HL_8C3A_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

9H3P|1|A|G|1491
9H3P|1|A|G|1492
9H3P|1|A|C|1493
9H3P|1|A|A|1494
9H3P|1|A|A|1495
9H3P|1|A|A|1496
9H3P|1|A|U|1497
9H3P|1|A|C|1498
9H3P|1|A|C|1499

Current chains

Chain A

23S ribosomal RNA

Nearby chains