HL_9H3Q_012
3D structure
- PDB id
- 9H3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S subunit precursor C-CP_YjgA_(L22)-~H61
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.02 Å
Loop
- Sequence
- GGACCAUC
- Length
- 8 nucleotides
- Bulged bases
- 9H3Q|1|A|G|411
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9H3Q_012 not in the Motif Atlas
- Homologous match to HL_7A0S_014
- Geometric discrepancy: 0.17
- The information below is about HL_7A0S_014
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_30680.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
9H3Q|1|A|G|410
9H3Q|1|A|G|411
9H3Q|1|A|A|412
9H3Q|1|A|C|413
9H3Q|1|A|C|414
9H3Q|1|A|A|415
9H3Q|1|A|U|416
9H3Q|1|A|C|417
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain L
- Large ribosomal subunit protein uL15
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