HL_9H3Q_043
3D structure
- PDB id
- 9H3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S subunit precursor C-CP_YjgA_(L22)-~H61
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.02 Å
Loop
- Sequence
- CUAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 9H3Q|1|A|A|2268, 9H3Q|1|A|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9H3Q_043 not in the Motif Atlas
- Homologous match to HL_5J7L_187
- Geometric discrepancy: 0.1529
- The information below is about HL_5J7L_187
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91939.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
9H3Q|1|A|C|2264
9H3Q|1|A|U|2265
9H3Q|1|A|A|2266
9H3Q|1|A|A|2267
9H3Q|1|A|A|2268
9H3Q|1|A|G|2269
9H3Q|1|A|A|2270
9H3Q|1|A|G|2271
9H3Q|1|A|U|2272
9H3Q|1|A|A|2273
9H3Q|1|A|A|2274
9H3Q|1|A|C|2275
9H3Q|1|A|G|2276
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain W
- Large ribosomal subunit protein bL27
Coloring options: