HL_9H3Q_052

3D structure

PDB id

9H3Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_YjgA_(L22)-~H61

Experimental method

ELECTRON MICROSCOPY

Resolution

4.02 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3Q_052 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.3997

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

9H3Q|1|A|C|2594
9H3Q|1|A|G|2595
9H3Q|1|A|U|2596
9H3Q|1|A|G|2597
9H3Q|1|A|A|2598
9H3Q|1|A|G|2599

Current chains

Chain A

23S ribosomal RNA

Nearby chains