HL_9H3W_027

3D structure

PDB id

9H3W (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_H68

Experimental method

ELECTRON MICROSCOPY

Resolution

5.38 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

9H3W|1|A|U|1174, 9H3W|1|A|A|1175

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3W_027 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.2581

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

9H3W|1|A|C|1172
9H3W|1|A|U|1173
9H3W|1|A|U|1174
9H3W|1|A|A|1175
9H3W|1|A|U|1176
9H3W|1|A|G|1177

Current chains

Chain A

23S ribosomal RNA

Nearby chains