HL_9H3Z_011

3D structure

PDB id

9H3Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

mature 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

9H3Z|1|A|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3Z_011 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.2186

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

9H3Z|1|A|A|382
9H3Z|1|A|C|383
9H3Z|1|A|A|384
9H3Z|1|A|C|385
9H3Z|1|A|G|386
9H3Z|1|A|U|387
9H3Z|1|A|G|388
9H3Z|1|A|G|389
9H3Z|1|A|U|390
9H3Z|1|A|A|391
9H3Z|1|A|U|392

Current chains

Chain A

23S ribosomal rRNA

Nearby chains

Chain X

Large ribosomal subunit protein bL28