HL_9H74_016
3D structure
- PDB id
- 9H74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACUUUAAAUCCUU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9H74_016 not in the Motif Atlas
- Homologous match to HL_9PN5_090
- Geometric discrepancy: 0.1495
- The information below is about HL_9PN5_090
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68749.3
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9H74|1|2|A|559
9H74|1|2|C|560
9H74|1|2|U|561
9H74|1|2|U|562
9H74|1|2|U|563
9H74|1|2|A|564
9H74|1|2|A|565
9H74|1|2|A|566
9H74|1|2|U|567
9H74|1|2|C|568
9H74|1|2|C|569
9H74|1|2|U|570
9H74|1|2|U|571
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain L
- 40S ribosomal protein S9
- Chain a
- 40S ribosomal protein S24
Coloring options: