HL_9H74_021

3D structure

PDB id

9H74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGGUGAAAUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H74|1|2|A|953
9H74|1|2|G|954
9H74|1|2|G|955
9H74|1|2|U|956
9H74|1|2|G|957
9H74|1|2|A|958
9H74|1|2|A|959
9H74|1|2|A|960
9H74|1|2|U|961
9H74|1|2|U|962

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain 3

Linear mRNA

Chain A

Eukaryotic translation initiation factor 2 subunit 1

Chain H

Ribosomal protein S5

Chain Q

40S ribosomal protein uS11