HL_9H9I_005
3D structure
- PDB id
- 9H9I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex 2 (HEAD) 30S-IF1-IF3-tRNA-GE81112
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUUAAGUC
- Length
- 8 nucleotides
- Bulged bases
- 9H9I|1|1|G|1094
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9H9I_005 not in the Motif Atlas
- Geometric match to HL_5J7L_024
- Geometric discrepancy: 0.1346
- The information below is about HL_5J7L_024
- Detailed Annotation
- T-loop related
- Broad Annotation
- T-loop
- Motif group
- HL_77436.5
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
9H9I|1|1|G|1089
9H9I|1|1|U|1090
9H9I|1|1|U|1091
9H9I|1|1|A|1092
9H9I|1|1|A|1093
9H9I|1|1|G|1094
9H9I|1|1|U|1095
9H9I|1|1|C|1096
Current chains
- Chain 1
- 16S RNA (head domain)
Nearby chains
- Chain B
- Small ribosomal subunit protein uS2
- Chain G
- Small ribosomal subunit protein uS7
Coloring options: