HL_9H9L_017

3D structure

PDB id

9H9L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex 3 (BODY) 30S-tRNA-GE81112

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

9H9L|1|A|U|793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H9L_017 not in the Motif Atlas

Geometric match to HL_5J7L_017

Geometric discrepancy: 0.0906

The information below is about HL_5J7L_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

9H9L|1|A|G|786
9H9L|1|A|A|787
9H9L|1|A|U|788
9H9L|1|A|U|789
9H9L|1|A|A|790
9H9L|1|A|G|791
9H9L|1|A|A|792
9H9L|1|A|U|793
9H9L|1|A|A|794
9H9L|1|A|C|795
9H9L|1|A|C|796

Current chains

Chain A

16S RNA (1078-MER)

Nearby chains

Chain K

Small ribosomal subunit protein uS11