HL_9HA3_005

3D structure

PDB id

9HA3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)-~H61 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.62 Å

Loop

Sequence

UGAAUCCAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HA3_005 not in the Motif Atlas

Homologous match to HL_5J7L_138

Geometric discrepancy: 0.3997

The information below is about HL_5J7L_138

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_68257.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

9HA3|1|A|U|158
9HA3|1|A|G|159
9HA3|1|A|A|160
9HA3|1|A|A|161
9HA3|1|A|U|162
9HA3|1|A|C|163
9HA3|1|A|C|164
9HA3|1|A|A|165
9HA3|1|A|U|166
9HA3|1|A|A|167
9HA3|1|A|G|168

Current chains

Chain A

23S ribosomal RNA

Nearby chains